Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 GIMAP3P-201ENST00000495150 836 ntBASIC15.29■□□□□ 0.04
HLA-DPA1P20036 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 AC025048.6-201ENST00000634326 1161 ntBASIC15.29■□□□□ 0.04
HLA-DPA1P20036 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 AC105233.6-201ENST00000642093 218 ntBASIC15.29■□□□□ 0.04
HLA-DPA1P20036 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 LRRC59-203ENST00000576448 1531 ntBASIC15.28■□□□□ 0.04
HLA-DPA1P20036 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 KRT8P35-201ENST00000483942 1338 ntBASIC15.28■□□□□ 0.04
HLA-DPA1P20036 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 AC093433.1-201ENST00000458048 571 ntBASIC15.28■□□□□ 0.04
HLA-DPA1P20036 AC011495.1-201ENST00000498085 584 ntBASIC15.28■□□□□ 0.04
HLA-DPA1P20036 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 AL358472.5-202ENST00000641448 1267 ntBASIC15.28■□□□□ 0.04
HLA-DPA1P20036 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HLA-DPA1P20036 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms