Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
GCFC2P16383 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GCFC2P16383 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
GCFC2P16383 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GCFC2P16383 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GCFC2P16383 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
GCFC2P16383 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 FAM197Y7-201ENST00000432892 766 ntBASIC17.08■□□□□ 0.32
GCFC2P16383 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.08■□□□□ 0.32
GCFC2P16383 ACA64.2-201ENST00000459014 129 ntBASIC17.08■□□□□ 0.32
GCFC2P16383 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
GCFC2P16383 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.08■□□□□ 0.32
GCFC2P16383 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.08■□□□□ 0.32
GCFC2P16383 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.08■□□□□ 0.32
GCFC2P16383 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
GCFC2P16383 AC004466.1-201ENST00000599515 1080 ntBASIC17.08■□□□□ 0.32
GCFC2P16383 AC138466.3-201ENST00000619983 221 ntBASIC17.08■□□□□ 0.32
GCFC2P16383 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
GCFC2P16383 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCFC2P16383 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
GCFC2P16383 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.07■□□□□ 0.32
GCFC2P16383 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 CLUHP2-201ENST00000426660 1303 ntBASIC17.07■□□□□ 0.32
GCFC2P16383 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 AC006001.1-201ENST00000325130 474 ntBASIC17.07■□□□□ 0.32
GCFC2P16383 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.07■□□□□ 0.32
GCFC2P16383 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.07■□□□□ 0.32
GCFC2P16383 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GCFC2P16383 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GCFC2P16383 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.07■□□□□ 0.32
GCFC2P16383 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 FTLP10-202ENST00000505798 471 ntBASIC17.07■□□□□ 0.32
GCFC2P16383 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.07■□□□□ 0.32
GCFC2P16383 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.07■□□□□ 0.32
GCFC2P16383 ECM1P1-201ENST00000604092 1279 ntBASIC17.07■□□□□ 0.32
GCFC2P16383 RHOXF1P1-202ENST00000635473 501 ntBASIC17.07■□□□□ 0.32
GCFC2P16383 AC006453.4-201ENST00000636949 1252 ntBASIC17.07■□□□□ 0.32
GCFC2P16383 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
GCFC2P16383 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GCFC2P16383 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.07■□□□□ 0.32
GCFC2P16383 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.07■□□□□ 0.32
GCFC2P16383 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.07■□□□□ 0.32
GCFC2P16383 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GCFC2P16383 CICP4-201ENST00000447359 2812 ntBASIC17.06■□□□□ 0.32
GCFC2P16383 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GCFC2P16383 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
GCFC2P16383 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.06■□□□□ 0.32
GCFC2P16383 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GCFC2P16383 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GCFC2P16383 FGD5P1-202ENST00000614866 2498 ntBASIC17.06■□□□□ 0.32
GCFC2P16383 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GCFC2P16383 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GCFC2P16383 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GCFC2P16383 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.06■□□□□ 0.32
GCFC2P16383 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.06■□□□□ 0.32
GCFC2P16383 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GCFC2P16383 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
GCFC2P16383 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GCFC2P16383 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GCFC2P16383 AC007969.1-201ENST00000433675 447 ntBASIC17.06■□□□□ 0.32
GCFC2P16383 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GCFC2P16383 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.06■□□□□ 0.32
GCFC2P16383 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GCFC2P16383 AC138951.2-201ENST00000623455 1161 ntBASIC17.06■□□□□ 0.32
GCFC2P16383 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GCFC2P16383 TNRC18P2-201ENST00000417666 2714 ntBASIC17.06■□□□□ 0.32
GCFC2P16383 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms