Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.09□□□□□ -0.15
UBL4AP11441 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 DRD5P1-201ENST00000456605 1438 ntBASIC14.09□□□□□ -0.15
UBL4AP11441 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
UBL4AP11441 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
UBL4AP11441 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.09□□□□□ -0.15
UBL4AP11441 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.09□□□□□ -0.15
UBL4AP11441 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.09□□□□□ -0.15
UBL4AP11441 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.09□□□□□ -0.15
UBL4AP11441 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
UBL4AP11441 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.09□□□□□ -0.15
UBL4AP11441 GAPDHP40-201ENST00000505218 1006 ntBASIC14.09□□□□□ -0.15
UBL4AP11441 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.09□□□□□ -0.15
UBL4AP11441 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.09□□□□□ -0.15
UBL4AP11441 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.09□□□□□ -0.15
UBL4AP11441 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.09□□□□□ -0.15
UBL4AP11441 LINC02560-201ENST00000596379 459 ntBASIC14.09□□□□□ -0.15
UBL4AP11441 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.09□□□□□ -0.15
UBL4AP11441 AC008761.3-201ENST00000624803 892 ntBASIC14.09□□□□□ -0.15
UBL4AP11441 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.09□□□□□ -0.15
UBL4AP11441 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.09□□□□□ -0.15
UBL4AP11441 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 AC007541.1-201ENST00000570282 1469 ntBASIC14.09□□□□□ -0.15
UBL4AP11441 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.09□□□□□ -0.15
UBL4AP11441 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
UBL4AP11441 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.09□□□□□ -0.15
UBL4AP11441 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 AP000845.1-201ENST00000581677 2131 ntBASIC14.09□□□□□ -0.15
UBL4AP11441 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
UBL4AP11441 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 Z82170.1-201ENST00000625081 3192 ntBASIC14.09□□□□□ -0.15
UBL4AP11441 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.09□□□□□ -0.15
UBL4AP11441 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.09□□□□□ -0.15
UBL4AP11441 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.09□□□□□ -0.15
UBL4AP11441 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
UBL4AP11441 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBL4AP11441 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
UBL4AP11441 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBL4AP11441 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBL4AP11441 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBL4AP11441 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBL4AP11441 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
UBL4AP11441 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.08□□□□□ -0.16
UBL4AP11441 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.08□□□□□ -0.16
UBL4AP11441 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.08□□□□□ -0.16
UBL4AP11441 AC097376.2-205ENST00000610159 5334 ntBASIC14.08□□□□□ -0.16
UBL4AP11441 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UBL4AP11441 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.08□□□□□ -0.16
UBL4AP11441 AC087499.6-201ENST00000411576 835 ntBASIC14.08□□□□□ -0.16
UBL4AP11441 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.08□□□□□ -0.16
UBL4AP11441 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.08□□□□□ -0.16
UBL4AP11441 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.08□□□□□ -0.16
UBL4AP11441 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.08□□□□□ -0.16
UBL4AP11441 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.08□□□□□ -0.16
UBL4AP11441 AC026410.3-201ENST00000514280 936 ntBASIC14.08□□□□□ -0.16
UBL4AP11441 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.08□□□□□ -0.16
UBL4AP11441 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.08□□□□□ -0.16
UBL4AP11441 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.08□□□□□ -0.16
UBL4AP11441 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.08□□□□□ -0.16
UBL4AP11441 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.08□□□□□ -0.16
UBL4AP11441 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
UBL4AP11441 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms