Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TOP1P11387 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.79■□□□□ 0.44
TOP1P11387 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.79■□□□□ 0.44
TOP1P11387 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TOP1P11387 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.79■□□□□ 0.44
TOP1P11387 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.79■□□□□ 0.44
TOP1P11387 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 AC026954.1-201ENST00000429771 1293 ntBASIC17.79■□□□□ 0.44
TOP1P11387 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 BNIP3P42-201ENST00000454982 569 ntBASIC17.79■□□□□ 0.44
TOP1P11387 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.79■□□□□ 0.44
TOP1P11387 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TOP1P11387 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.79■□□□□ 0.44
TOP1P11387 BNIP3P29-201ENST00000598302 571 ntBASIC17.79■□□□□ 0.44
TOP1P11387 AC011447.5-201ENST00000616168 564 ntBASIC17.79■□□□□ 0.44
TOP1P11387 AC138951.2-201ENST00000623455 1161 ntBASIC17.79■□□□□ 0.44
TOP1P11387 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.79■□□□□ 0.44
TOP1P11387 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.79■□□□□ 0.44
TOP1P11387 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TOP1P11387 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.79■□□□□ 0.44
TOP1P11387 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.79■□□□□ 0.44
TOP1P11387 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOP1P11387 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.78■□□□□ 0.44
TOP1P11387 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.78■□□□□ 0.44
TOP1P11387 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.78■□□□□ 0.44
TOP1P11387 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TOP1P11387 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TOP1P11387 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.78■□□□□ 0.44
TOP1P11387 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TOP1P11387 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.78■□□□□ 0.44
TOP1P11387 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.78■□□□□ 0.44
TOP1P11387 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TOP1P11387 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.78■□□□□ 0.44
TOP1P11387 AC007274.1-201ENST00000439805 662 ntBASIC17.78■□□□□ 0.44
TOP1P11387 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 AL590640.2-201ENST00000457038 527 ntBASIC17.78■□□□□ 0.44
TOP1P11387 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.78■□□□□ 0.44
TOP1P11387 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.78■□□□□ 0.44
TOP1P11387 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.78■□□□□ 0.44
TOP1P11387 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TOP1P11387 ENPP7P14-201ENST00000621765 1040 ntBASIC17.78■□□□□ 0.44
TOP1P11387 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TOP1P11387 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.78■□□□□ 0.44
TOP1P11387 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.78■□□□□ 0.44
TOP1P11387 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 MROH4P-201ENST00000431302 1578 ntBASIC17.78■□□□□ 0.44
TOP1P11387 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.78■□□□□ 0.44
TOP1P11387 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TOP1P11387 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TOP1P11387 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
TOP1P11387 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOP1P11387 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TOP1P11387 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.77■□□□□ 0.44
TOP1P11387 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TOP1P11387 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
TOP1P11387 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms