Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
THRAP10827 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
THRAP10827 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.27■□□□□ 0.04
THRAP10827 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.27■□□□□ 0.04
THRAP10827 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.27■□□□□ 0.04
THRAP10827 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
THRAP10827 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.27■□□□□ 0.04
THRAP10827 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.27■□□□□ 0.04
THRAP10827 KRT17P8-201ENST00000540749 863 ntBASIC15.27■□□□□ 0.04
THRAP10827 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.27■□□□□ 0.04
THRAP10827 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.27■□□□□ 0.04
THRAP10827 MIR8072-201ENST00000614241 80 ntBASIC15.27■□□□□ 0.04
THRAP10827 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
THRAP10827 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.27■□□□□ 0.04
THRAP10827 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.27■□□□□ 0.04
THRAP10827 AL158212.4-201ENST00000624062 1286 ntBASIC15.27■□□□□ 0.04
THRAP10827 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.27■□□□□ 0.04
THRAP10827 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
THRAP10827 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
THRAP10827 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.27■□□□□ 0.03
THRAP10827 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
THRAP10827 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
THRAP10827 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
THRAP10827 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.27■□□□□ 0.03
THRAP10827 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
THRAP10827 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
THRAP10827 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
THRAP10827 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
THRAP10827 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
THRAP10827 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 AC005840.4-201ENST00000541242 2494 ntBASIC15.26■□□□□ 0.03
THRAP10827 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.26■□□□□ 0.03
THRAP10827 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.26■□□□□ 0.03
THRAP10827 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
THRAP10827 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 AC112492.5-201ENST00000421897 457 ntBASIC15.26■□□□□ 0.03
THRAP10827 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.26■□□□□ 0.03
THRAP10827 AC007389.4-201ENST00000454674 793 ntBASIC15.26■□□□□ 0.03
THRAP10827 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.26■□□□□ 0.03
THRAP10827 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.26■□□□□ 0.03
THRAP10827 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.26■□□□□ 0.03
THRAP10827 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.26■□□□□ 0.03
THRAP10827 AC092552.1-201ENST00000547243 906 ntBASIC15.26■□□□□ 0.03
THRAP10827 RAB43P1-201ENST00000561790 589 ntBASIC15.26■□□□□ 0.03
THRAP10827 AC036164.1-201ENST00000570544 333 ntBASIC15.26■□□□□ 0.03
THRAP10827 AL033527.5-201ENST00000641382 801 ntBASIC15.26■□□□□ 0.03
THRAP10827 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
THRAP10827 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
THRAP10827 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
THRAP10827 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.26■□□□□ 0.03
THRAP10827 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
THRAP10827 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.25■□□□□ 0.03
THRAP10827 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.25■□□□□ 0.03
THRAP10827 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
THRAP10827 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.25■□□□□ 0.03
THRAP10827 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
THRAP10827 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.25■□□□□ 0.03
THRAP10827 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.25■□□□□ 0.03
THRAP10827 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
THRAP10827 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.25■□□□□ 0.03
THRAP10827 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.25■□□□□ 0.03
THRAP10827 AC074338.1-201ENST00000416825 156 ntBASIC15.25■□□□□ 0.03
THRAP10827 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.25■□□□□ 0.03
THRAP10827 TMEM14DP-201ENST00000422205 345 ntBASIC15.25■□□□□ 0.03
THRAP10827 TARDBPP1-201ENST00000442013 1203 ntBASIC15.25■□□□□ 0.03
THRAP10827 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.25■□□□□ 0.03
THRAP10827 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 RN7SL399P-201ENST00000471648 279 ntBASIC15.25■□□□□ 0.03
THRAP10827 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.25■□□□□ 0.03
THRAP10827 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.25■□□□□ 0.03
THRAP10827 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms