Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.05
LDLRP01130 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.73□□□□□ -0.05
LDLRP01130 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.73□□□□□ -0.05
LDLRP01130 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.73□□□□□ -0.05
LDLRP01130 AC135586.1-201ENST00000539323 574 ntBASIC14.73□□□□□ -0.05
LDLRP01130 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.73□□□□□ -0.05
LDLRP01130 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.73□□□□□ -0.05
LDLRP01130 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
LDLRP01130 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.73□□□□□ -0.05
LDLRP01130 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.73□□□□□ -0.05
LDLRP01130 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.73□□□□□ -0.05
LDLRP01130 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.73□□□□□ -0.05
LDLRP01130 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.73□□□□□ -0.05
LDLRP01130 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LDLRP01130 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
LDLRP01130 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LDLRP01130 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.73□□□□□ -0.05
LDLRP01130 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.73□□□□□ -0.05
LDLRP01130 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.73□□□□□ -0.05
LDLRP01130 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LDLRP01130 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDLRP01130 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDLRP01130 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LDLRP01130 BX640514.1-201ENST00000583223 1918 ntBASIC14.72□□□□□ -0.05
LDLRP01130 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDLRP01130 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.72□□□□□ -0.05
LDLRP01130 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDLRP01130 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
LDLRP01130 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LDLRP01130 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.72□□□□□ -0.05
LDLRP01130 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.72□□□□□ -0.05
LDLRP01130 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDLRP01130 BTBD7P1-201ENST00000447253 1453 ntBASIC14.72□□□□□ -0.05
LDLRP01130 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LDLRP01130 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.72□□□□□ -0.05
LDLRP01130 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LDLRP01130 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LDLRP01130 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
LDLRP01130 RPL37AP1-201ENST00000412502 279 ntBASIC14.72□□□□□ -0.05
LDLRP01130 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LDLRP01130 AL353705.2-201ENST00000428243 662 ntBASIC14.72□□□□□ -0.05
LDLRP01130 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.72□□□□□ -0.05
LDLRP01130 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.72□□□□□ -0.05
LDLRP01130 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
LDLRP01130 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LDLRP01130 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
LDLRP01130 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
LDLRP01130 WASH4P-201ENST00000564273 1246 ntBASIC14.72□□□□□ -0.05
LDLRP01130 MIR4525-201ENST00000580000 75 ntBASIC14.72□□□□□ -0.05
LDLRP01130 AC008494.3-201ENST00000606615 944 ntBASIC14.72□□□□□ -0.05
LDLRP01130 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDLRP01130 AL589739.1-201ENST00000607720 493 ntBASIC14.72□□□□□ -0.05
LDLRP01130 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.72□□□□□ -0.05
LDLRP01130 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.72□□□□□ -0.05
LDLRP01130 AL033527.4-201ENST00000641026 673 ntBASIC14.72□□□□□ -0.05
LDLRP01130 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.72□□□□□ -0.05
LDLRP01130 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDLRP01130 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.72□□□□□ -0.05
LDLRP01130 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.72□□□□□ -0.05
LDLRP01130 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDLRP01130 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDLRP01130 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDLRP01130 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDLRP01130 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LDLRP01130 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.71□□□□□ -0.05
LDLRP01130 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.71□□□□□ -0.05
LDLRP01130 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
LDLRP01130 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LDLRP01130 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.71□□□□□ -0.05
LDLRP01130 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LDLRP01130 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LDLRP01130 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LDLRP01130 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LDLRP01130 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.71□□□□□ -0.05
LDLRP01130 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LDLRP01130 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.71□□□□□ -0.05
LDLRP01130 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LDLRP01130 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LDLRP01130 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LDLRP01130 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.71□□□□□ -0.05
LDLRP01130 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.71□□□□□ -0.05
LDLRP01130 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LDLRP01130 HLA-H-201ENST00000383620 1096 ntBASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms