Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 UROS-201ENST00000368774 744 ntTSL 2 BASIC14.95□□□□□ -0.02
PDGFBP01127 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PDGFBP01127 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
PDGFBP01127 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 XBP1P1-201ENST00000436573 652 ntBASIC14.95□□□□□ -0.02
PDGFBP01127 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.95□□□□□ -0.02
PDGFBP01127 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PDGFBP01127 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC14.95□□□□□ -0.02
PDGFBP01127 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC14.95□□□□□ -0.02
PDGFBP01127 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC14.95□□□□□ -0.02
PDGFBP01127 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.95□□□□□ -0.02
PDGFBP01127 AL627230.2-201ENST00000613254 655 ntBASIC14.95□□□□□ -0.02
PDGFBP01127 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.95□□□□□ -0.02
PDGFBP01127 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.95□□□□□ -0.02
PDGFBP01127 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.95□□□□□ -0.02
PDGFBP01127 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.95□□□□□ -0.02
PDGFBP01127 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
PDGFBP01127 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 PKD1P5-201ENST00000532415 10291 ntBASIC14.95□□□□□ -0.02
PDGFBP01127 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.95□□□□□ -0.02
PDGFBP01127 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.94□□□□□ -0.02
PDGFBP01127 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PDGFBP01127 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.94□□□□□ -0.02
PDGFBP01127 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.94□□□□□ -0.02
PDGFBP01127 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
PDGFBP01127 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PDGFBP01127 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.94□□□□□ -0.02
PDGFBP01127 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 LINC01815-202ENST00000641468 1409 ntBASIC14.94□□□□□ -0.02
PDGFBP01127 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PDGFBP01127 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PDGFBP01127 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.94□□□□□ -0.02
PDGFBP01127 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.94□□□□□ -0.02
PDGFBP01127 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.94□□□□□ -0.02
PDGFBP01127 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.94□□□□□ -0.02
PDGFBP01127 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.94□□□□□ -0.02
PDGFBP01127 HERC2P11-201ENST00000562845 725 ntBASIC14.94□□□□□ -0.02
PDGFBP01127 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 AC100756.2-201ENST00000569537 736 ntBASIC14.94□□□□□ -0.02
PDGFBP01127 MIR5001-201ENST00000580185 100 ntBASIC14.94□□□□□ -0.02
PDGFBP01127 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.94□□□□□ -0.02
PDGFBP01127 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.94□□□□□ -0.02
PDGFBP01127 AP000322.3-201ENST00000608665 388 ntBASIC14.94□□□□□ -0.02
PDGFBP01127 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.94□□□□□ -0.02
PDGFBP01127 AL662844.4-201ENST00000606367 2838 ntBASIC14.94□□□□□ -0.02
PDGFBP01127 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PDGFBP01127 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.94□□□□□ -0.02
PDGFBP01127 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 MARK2P16-201ENST00000605714 1723 ntBASIC14.94□□□□□ -0.02
PDGFBP01127 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.94□□□□□ -0.02
PDGFBP01127 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PDGFBP01127 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PDGFBP01127 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDGFBP01127 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.93□□□□□ -0.02
PDGFBP01127 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.93□□□□□ -0.02
PDGFBP01127 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.93□□□□□ -0.02
PDGFBP01127 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.93□□□□□ -0.02
PDGFBP01127 AC009090.5-201ENST00000624886 2285 ntBASIC14.93□□□□□ -0.02
PDGFBP01127 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms