Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TIMP1P01033 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.04■□□□□ 0.16
TIMP1P01033 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.04■□□□□ 0.16
TIMP1P01033 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
TIMP1P01033 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.04■□□□□ 0.16
TIMP1P01033 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TIMP1P01033 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TIMP1P01033 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.04■□□□□ 0.16
TIMP1P01033 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.04■□□□□ 0.16
TIMP1P01033 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.04■□□□□ 0.16
TIMP1P01033 GCSHP3-201ENST00000431120 391 ntBASIC16.04■□□□□ 0.16
TIMP1P01033 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.04■□□□□ 0.16
TIMP1P01033 RN7SL530P-201ENST00000485097 298 ntBASIC16.04■□□□□ 0.16
TIMP1P01033 AP000322.3-201ENST00000608665 388 ntBASIC16.04■□□□□ 0.16
TIMP1P01033 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.04■□□□□ 0.16
TIMP1P01033 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TIMP1P01033 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TIMP1P01033 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.04■□□□□ 0.16
TIMP1P01033 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.04■□□□□ 0.16
TIMP1P01033 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.04■□□□□ 0.16
TIMP1P01033 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.04■□□□□ 0.16
TIMP1P01033 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.04■□□□□ 0.16
TIMP1P01033 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TIMP1P01033 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TIMP1P01033 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TIMP1P01033 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.03■□□□□ 0.16
TIMP1P01033 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.03■□□□□ 0.16
TIMP1P01033 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 AC023090.2-201ENST00000625182 2110 ntBASIC16.03■□□□□ 0.16
TIMP1P01033 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TIMP1P01033 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.03■□□□□ 0.16
TIMP1P01033 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC16.03■□□□□ 0.16
TIMP1P01033 NHP2-202ENST00000314397 599 ntTSL 2 BASIC16.03■□□□□ 0.16
TIMP1P01033 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC16.03■□□□□ 0.16
TIMP1P01033 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.03■□□□□ 0.16
TIMP1P01033 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.03■□□□□ 0.16
TIMP1P01033 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.03■□□□□ 0.16
TIMP1P01033 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 DPY19L2P5-201ENST00000456300 331 ntBASIC16.03■□□□□ 0.16
TIMP1P01033 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.03■□□□□ 0.16
TIMP1P01033 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.03■□□□□ 0.16
TIMP1P01033 AC003686.1-201ENST00000550956 1034 ntBASIC16.03■□□□□ 0.16
TIMP1P01033 AC138701.2-201ENST00000553634 226 ntBASIC16.03■□□□□ 0.16
TIMP1P01033 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.03■□□□□ 0.16
TIMP1P01033 AL022334.2-201ENST00000610000 484 ntBASIC16.03■□□□□ 0.16
TIMP1P01033 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TIMP1P01033 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
TIMP1P01033 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.03■□□□□ 0.16
TIMP1P01033 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TIMP1P01033 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.03■□□□□ 0.16
TIMP1P01033 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.03■□□□□ 0.16
TIMP1P01033 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TIMP1P01033 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 AC099398.1-201ENST00000567919 2776 ntBASIC16.03■□□□□ 0.16
TIMP1P01033 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
TIMP1P01033 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMP1P01033 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TIMP1P01033 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TIMP1P01033 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.02■□□□□ 0.16
TIMP1P01033 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TIMP1P01033 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.02■□□□□ 0.16
TIMP1P01033 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.02■□□□□ 0.16
TIMP1P01033 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TIMP1P01033 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.02■□□□□ 0.16
TIMP1P01033 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TIMP1P01033 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TIMP1P01033 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TIMP1P01033 PCDH8P1-201ENST00000428983 2773 ntBASIC16.02■□□□□ 0.16
TIMP1P01033 AC010491.1-201ENST00000563101 2797 ntBASIC16.02■□□□□ 0.16
TIMP1P01033 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TIMP1P01033 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TIMP1P01033 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TIMP1P01033 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TIMP1P01033 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms