Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.33□□□□□ -0.12
SNX4O95219 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.33□□□□□ -0.12
SNX4O95219 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX4O95219 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX4O95219 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX4O95219 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX4O95219 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SNX4O95219 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
SNX4O95219 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX4O95219 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNX4O95219 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.33□□□□□ -0.12
SNX4O95219 AC009090.5-201ENST00000624886 2285 ntBASIC14.32□□□□□ -0.12
SNX4O95219 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.32□□□□□ -0.12
SNX4O95219 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
SNX4O95219 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 AC126335.2-201ENST00000623362 4637 ntBASIC14.32□□□□□ -0.12
SNX4O95219 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.32□□□□□ -0.12
SNX4O95219 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SNX4O95219 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SNX4O95219 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
SNX4O95219 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.32□□□□□ -0.12
SNX4O95219 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.32□□□□□ -0.12
SNX4O95219 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.32□□□□□ -0.12
SNX4O95219 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SNX4O95219 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.32□□□□□ -0.12
SNX4O95219 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.32□□□□□ -0.12
SNX4O95219 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
SNX4O95219 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.32□□□□□ -0.12
SNX4O95219 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.32□□□□□ -0.12
SNX4O95219 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 RN7SL692P-201ENST00000464677 288 ntBASIC14.32□□□□□ -0.12
SNX4O95219 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.32□□□□□ -0.12
SNX4O95219 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.32□□□□□ -0.12
SNX4O95219 CR383656.12-201ENST00000549567 513 ntBASIC14.32□□□□□ -0.12
SNX4O95219 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.32□□□□□ -0.12
SNX4O95219 AC005225.4-201ENST00000557330 545 ntBASIC14.32□□□□□ -0.12
SNX4O95219 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.32□□□□□ -0.12
SNX4O95219 AL596325.1-201ENST00000563991 1082 ntBASIC14.32□□□□□ -0.12
SNX4O95219 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.32□□□□□ -0.12
SNX4O95219 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.32□□□□□ -0.12
SNX4O95219 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
SNX4O95219 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.32□□□□□ -0.12
SNX4O95219 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SNX4O95219 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNX4O95219 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNX4O95219 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.32□□□□□ -0.12
SNX4O95219 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.32□□□□□ -0.12
SNX4O95219 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SNX4O95219 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX4O95219 AC117489.1-201ENST00000625169 3217 ntBASIC14.32□□□□□ -0.12
SNX4O95219 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SNX4O95219 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SNX4O95219 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SNX4O95219 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.31□□□□□ -0.12
SNX4O95219 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.31□□□□□ -0.12
SNX4O95219 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.31□□□□□ -0.12
SNX4O95219 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.31□□□□□ -0.12
SNX4O95219 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
SNX4O95219 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.31□□□□□ -0.12
SNX4O95219 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SNX4O95219 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SNX4O95219 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 AP006294.1-201ENST00000415407 339 ntBASIC14.31□□□□□ -0.12
SNX4O95219 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SNX4O95219 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.31□□□□□ -0.12
SNX4O95219 FAM86LP-201ENST00000478302 853 ntBASIC14.31□□□□□ -0.12
SNX4O95219 AC011495.1-201ENST00000498085 584 ntBASIC14.31□□□□□ -0.12
SNX4O95219 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SNX4O95219 AP005018.1-201ENST00000525475 301 ntBASIC14.31□□□□□ -0.12
SNX4O95219 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms