Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.48□□□□□ -0.09
LCMT2O60294 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.48□□□□□ -0.09
LCMT2O60294 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.48□□□□□ -0.09
LCMT2O60294 FTH1P14-201ENST00000482930 551 ntBASIC14.48□□□□□ -0.09
LCMT2O60294 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.48□□□□□ -0.09
LCMT2O60294 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LCMT2O60294 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.48□□□□□ -0.09
LCMT2O60294 AL022328.1-201ENST00000610050 478 ntBASIC14.48□□□□□ -0.09
LCMT2O60294 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
LCMT2O60294 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LCMT2O60294 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.48□□□□□ -0.09
LCMT2O60294 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LCMT2O60294 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.48□□□□□ -0.09
LCMT2O60294 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LCMT2O60294 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.48□□□□□ -0.09
LCMT2O60294 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.47□□□□□ -0.09
LCMT2O60294 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.47□□□□□ -0.09
LCMT2O60294 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LCMT2O60294 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.47□□□□□ -0.09
LCMT2O60294 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LCMT2O60294 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.47□□□□□ -0.09
LCMT2O60294 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.47□□□□□ -0.09
LCMT2O60294 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LCMT2O60294 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.47□□□□□ -0.09
LCMT2O60294 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.47□□□□□ -0.09
LCMT2O60294 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 U91328.1-201ENST00000437528 223 ntBASIC14.47□□□□□ -0.09
LCMT2O60294 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.47□□□□□ -0.09
LCMT2O60294 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.47□□□□□ -0.09
LCMT2O60294 CROCCP4-201ENST00000457096 498 ntBASIC14.47□□□□□ -0.09
LCMT2O60294 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.47□□□□□ -0.09
LCMT2O60294 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
LCMT2O60294 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.47□□□□□ -0.09
LCMT2O60294 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.47□□□□□ -0.09
LCMT2O60294 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.47□□□□□ -0.09
LCMT2O60294 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.47□□□□□ -0.09
LCMT2O60294 AC244669.2-201ENST00000612320 853 ntBASIC14.47□□□□□ -0.09
LCMT2O60294 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.47□□□□□ -0.09
LCMT2O60294 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LCMT2O60294 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.47□□□□□ -0.09
LCMT2O60294 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
LCMT2O60294 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LCMT2O60294 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LCMT2O60294 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.47□□□□□ -0.09
LCMT2O60294 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LCMT2O60294 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LCMT2O60294 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.47□□□□□ -0.09
LCMT2O60294 AC018529.2-202ENST00000611482 3087 ntBASIC14.47□□□□□ -0.09
LCMT2O60294 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
LCMT2O60294 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LCMT2O60294 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
LCMT2O60294 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.46□□□□□ -0.09
LCMT2O60294 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LCMT2O60294 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.46□□□□□ -0.09
LCMT2O60294 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.46□□□□□ -0.09
LCMT2O60294 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 AC106881.1-201ENST00000605849 3329 ntBASIC14.46□□□□□ -0.09
LCMT2O60294 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.46□□□□□ -0.09
LCMT2O60294 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.46□□□□□ -0.09
LCMT2O60294 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.46□□□□□ -0.09
LCMT2O60294 FO681548.1-201ENST00000455617 1132 ntBASIC14.46□□□□□ -0.09
LCMT2O60294 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms