Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.41□□□□□ -0.42
SSSCA1O60232 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.41□□□□□ -0.42
SSSCA1O60232 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.41□□□□□ -0.42
SSSCA1O60232 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
SSSCA1O60232 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.41□□□□□ -0.42
SSSCA1O60232 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.41□□□□□ -0.42
SSSCA1O60232 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.41□□□□□ -0.42
SSSCA1O60232 Z83851.2-201ENST00000609564 659 ntBASIC12.41□□□□□ -0.42
SSSCA1O60232 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.41□□□□□ -0.42
SSSCA1O60232 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SSSCA1O60232 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SSSCA1O60232 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SSSCA1O60232 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.41□□□□□ -0.42
SSSCA1O60232 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.41□□□□□ -0.42
SSSCA1O60232 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.41□□□□□ -0.42
SSSCA1O60232 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SSSCA1O60232 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SSSCA1O60232 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSSCA1O60232 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.4□□□□□ -0.42
SSSCA1O60232 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.4□□□□□ -0.42
SSSCA1O60232 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.4□□□□□ -0.42
SSSCA1O60232 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.4□□□□□ -0.42
SSSCA1O60232 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
SSSCA1O60232 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.4□□□□□ -0.42
SSSCA1O60232 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SSSCA1O60232 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
SSSCA1O60232 AL355306.1-201ENST00000415580 579 ntBASIC12.4□□□□□ -0.42
SSSCA1O60232 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.4□□□□□ -0.42
SSSCA1O60232 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.4□□□□□ -0.42
SSSCA1O60232 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.4□□□□□ -0.42
SSSCA1O60232 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.4□□□□□ -0.42
SSSCA1O60232 IGHV3-22-201ENST00000520721 359 ntBASIC12.4□□□□□ -0.42
SSSCA1O60232 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.4□□□□□ -0.42
SSSCA1O60232 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
SSSCA1O60232 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SSSCA1O60232 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.4□□□□□ -0.42
SSSCA1O60232 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.4□□□□□ -0.42
SSSCA1O60232 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.4□□□□□ -0.42
SSSCA1O60232 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.4□□□□□ -0.42
SSSCA1O60232 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.4□□□□□ -0.42
SSSCA1O60232 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
SSSCA1O60232 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSSCA1O60232 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.4□□□□□ -0.42
SSSCA1O60232 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
SSSCA1O60232 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SSSCA1O60232 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SSSCA1O60232 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SSSCA1O60232 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.4□□□□□ -0.43
SSSCA1O60232 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.4□□□□□ -0.43
SSSCA1O60232 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.4□□□□□ -0.43
SSSCA1O60232 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.4□□□□□ -0.43
SSSCA1O60232 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SSSCA1O60232 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SSSCA1O60232 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
SSSCA1O60232 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSSCA1O60232 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSSCA1O60232 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
SSSCA1O60232 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSSCA1O60232 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
SSSCA1O60232 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
SSSCA1O60232 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.39□□□□□ -0.43
SSSCA1O60232 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.39□□□□□ -0.43
SSSCA1O60232 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSSCA1O60232 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSSCA1O60232 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.39□□□□□ -0.43
SSSCA1O60232 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSSCA1O60232 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.39□□□□□ -0.43
SSSCA1O60232 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.39□□□□□ -0.43
SSSCA1O60232 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSSCA1O60232 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSSCA1O60232 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 569 ms