Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHMP2AO43633 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP2AO43633 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP2AO43633 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP2AO43633 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.02■□□□□ 0.32
CHMP2AO43633 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CHMP2AO43633 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.02■□□□□ 0.32
CHMP2AO43633 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.02■□□□□ 0.32
CHMP2AO43633 RPS2P32-201ENST00000439199 892 ntBASIC17.02■□□□□ 0.32
CHMP2AO43633 AC245100.3-201ENST00000441281 285 ntBASIC17.02■□□□□ 0.32
CHMP2AO43633 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP2AO43633 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP2AO43633 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.02■□□□□ 0.32
CHMP2AO43633 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP2AO43633 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.02■□□□□ 0.32
CHMP2AO43633 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.02■□□□□ 0.32
CHMP2AO43633 DUX4L47-201ENST00000566374 394 ntBASIC17.02■□□□□ 0.32
CHMP2AO43633 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.02■□□□□ 0.32
CHMP2AO43633 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP2AO43633 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHMP2AO43633 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.02■□□□□ 0.32
CHMP2AO43633 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CHMP2AO43633 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.02■□□□□ 0.31
CHMP2AO43633 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP2AO43633 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CHMP2AO43633 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP2AO43633 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP2AO43633 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.02■□□□□ 0.31
CHMP2AO43633 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP2AO43633 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.02■□□□□ 0.31
CHMP2AO43633 AC104640.1-201ENST00000562617 2109 ntBASIC17.02■□□□□ 0.31
CHMP2AO43633 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP2AO43633 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP2AO43633 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CHMP2AO43633 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP2AO43633 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP2AO43633 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHMP2AO43633 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CHMP2AO43633 AGAP7P-201ENST00000582299 2062 ntBASIC17.01■□□□□ 0.31
CHMP2AO43633 AGAP14-201ENST00000624701 2060 ntBASIC17.01■□□□□ 0.31
CHMP2AO43633 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHMP2AO43633 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.01■□□□□ 0.31
CHMP2AO43633 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP2AO43633 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.01■□□□□ 0.31
CHMP2AO43633 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP2AO43633 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHMP2AO43633 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CHMP2AO43633 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CHMP2AO43633 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.01■□□□□ 0.31
CHMP2AO43633 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.01■□□□□ 0.31
CHMP2AO43633 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.01■□□□□ 0.31
CHMP2AO43633 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.01■□□□□ 0.31
CHMP2AO43633 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.01■□□□□ 0.31
CHMP2AO43633 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.01■□□□□ 0.31
CHMP2AO43633 MIR6752-201ENST00000618442 71 ntBASIC17.01■□□□□ 0.31
CHMP2AO43633 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP2AO43633 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.01■□□□□ 0.31
CHMP2AO43633 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.01■□□□□ 0.31
CHMP2AO43633 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CHMP2AO43633 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 LINC00528-201ENST00000600723 2160 ntBASIC17.01■□□□□ 0.31
CHMP2AO43633 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP2AO43633 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP2AO43633 TCAF2P1-201ENST00000291129 2421 ntBASIC17■□□□□ 0.31
CHMP2AO43633 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP2AO43633 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP2AO43633 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP2AO43633 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHMP2AO43633 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
CHMP2AO43633 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP2AO43633 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CHMP2AO43633 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP2AO43633 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP2AO43633 AC006001.1-201ENST00000325130 474 ntBASIC17■□□□□ 0.31
CHMP2AO43633 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP2AO43633 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHMP2AO43633 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP2AO43633 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17■□□□□ 0.31
CHMP2AO43633 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17■□□□□ 0.31
CHMP2AO43633 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP2AO43633 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHMP2AO43633 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CHMP2AO43633 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
CHMP2AO43633 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17■□□□□ 0.31
CHMP2AO43633 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms