Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
RNF13O43567 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
RNF13O43567 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.85□□□□□ -0.19
RNF13O43567 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RNF13O43567 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.85□□□□□ -0.19
RNF13O43567 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.85□□□□□ -0.19
RNF13O43567 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.85□□□□□ -0.19
RNF13O43567 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.85□□□□□ -0.19
RNF13O43567 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.85□□□□□ -0.19
RNF13O43567 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
RNF13O43567 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.85□□□□□ -0.19
RNF13O43567 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.85□□□□□ -0.19
RNF13O43567 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
RNF13O43567 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF13O43567 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.84□□□□□ -0.19
RNF13O43567 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.84□□□□□ -0.19
RNF13O43567 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RNF13O43567 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
RNF13O43567 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RNF13O43567 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 AP000845.1-201ENST00000581677 2131 ntBASIC13.84□□□□□ -0.19
RNF13O43567 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RNF13O43567 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.84□□□□□ -0.19
RNF13O43567 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.84□□□□□ -0.19
RNF13O43567 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.84□□□□□ -0.19
RNF13O43567 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
RNF13O43567 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.84□□□□□ -0.19
RNF13O43567 AC011467.4-201ENST00000594891 528 ntBASIC13.84□□□□□ -0.19
RNF13O43567 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.84□□□□□ -0.19
RNF13O43567 AL158212.4-201ENST00000624062 1286 ntBASIC13.84□□□□□ -0.19
RNF13O43567 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.84□□□□□ -0.19
RNF13O43567 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.84□□□□□ -0.19
RNF13O43567 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 AC004840.1-201ENST00000636359 365 ntBASIC13.84□□□□□ -0.19
RNF13O43567 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.84□□□□□ -0.19
RNF13O43567 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
RNF13O43567 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.84□□□□□ -0.19
RNF13O43567 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
RNF13O43567 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
RNF13O43567 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.84□□□□□ -0.19
RNF13O43567 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 LINC01230-201ENST00000625222 3017 ntBASIC13.84□□□□□ -0.19
RNF13O43567 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.84□□□□□ -0.19
RNF13O43567 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
RNF13O43567 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.84□□□□□ -0.19
RNF13O43567 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RNF13O43567 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RNF13O43567 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RNF13O43567 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RNF13O43567 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.84□□□□□ -0.19
RNF13O43567 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
RNF13O43567 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
RNF13O43567 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RNF13O43567 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.84□□□□□ -0.19
RNF13O43567 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RNF13O43567 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RNF13O43567 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.83□□□□□ -0.19
RNF13O43567 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
RNF13O43567 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RNF13O43567 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RNF13O43567 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RNF13O43567 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
RNF13O43567 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
RNF13O43567 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
RNF13O43567 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.83□□□□□ -0.19
RNF13O43567 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.83□□□□□ -0.2
RNF13O43567 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RNF13O43567 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms