Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM38O00635 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRIM38O00635 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM38O00635 BRWD1P1-201ENST00000401091 371 ntBASIC15.3■□□□□ 0.04
TRIM38O00635 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRIM38O00635 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRIM38O00635 FAM21FP-201ENST00000426241 1131 ntBASIC15.3■□□□□ 0.04
TRIM38O00635 AC012441.1-201ENST00000446669 685 ntBASIC15.3■□□□□ 0.04
TRIM38O00635 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM38O00635 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM38O00635 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM38O00635 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TRIM38O00635 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM38O00635 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM38O00635 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRIM38O00635 AP001063.1-201ENST00000568332 529 ntBASIC15.3■□□□□ 0.04
TRIM38O00635 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRIM38O00635 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM38O00635 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM38O00635 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.3■□□□□ 0.04
TRIM38O00635 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRIM38O00635 MIR6787-201ENST00000616675 61 ntBASIC15.3■□□□□ 0.04
TRIM38O00635 AL365209.1-201ENST00000624418 6473 ntBASIC15.3■□□□□ 0.04
TRIM38O00635 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM38O00635 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM38O00635 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM38O00635 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM38O00635 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM38O00635 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM38O00635 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRIM38O00635 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM38O00635 AL121723.1-201ENST00000445194 1519 ntBASIC15.29■□□□□ 0.04
TRIM38O00635 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM38O00635 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRIM38O00635 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRIM38O00635 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM38O00635 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 AC106760.1-201ENST00000508690 800 ntBASIC15.29■□□□□ 0.04
TRIM38O00635 AC244669.2-201ENST00000612320 853 ntBASIC15.29■□□□□ 0.04
TRIM38O00635 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM38O00635 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM38O00635 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM38O00635 AC009090.5-201ENST00000624886 2285 ntBASIC15.29■□□□□ 0.04
TRIM38O00635 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
TRIM38O00635 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM38O00635 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM38O00635 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM38O00635 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.28■□□□□ 0.04
TRIM38O00635 FGD5P1-202ENST00000614866 2498 ntBASIC15.28■□□□□ 0.04
TRIM38O00635 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM38O00635 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM38O00635 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM38O00635 AL133338.1-201ENST00000565695 1517 ntBASIC15.28■□□□□ 0.04
TRIM38O00635 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM38O00635 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM38O00635 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM38O00635 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRIM38O00635 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM38O00635 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM38O00635 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRIM38O00635 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM38O00635 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM38O00635 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms