Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 AL391647.1-201ENST00000395664 511 ntBASIC10.65□□□□□ -0.7
LINC01546A6NGU7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 KRT18P43-201ENST00000469825 1281 ntBASIC10.65□□□□□ -0.7
LINC01546A6NGU7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 AC112191.1-201ENST00000523689 701 ntBASIC10.65□□□□□ -0.7
LINC01546A6NGU7 KRT18P8-201ENST00000581937 1246 ntBASIC10.65□□□□□ -0.7
LINC01546A6NGU7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 AC004877.2-201ENST00000623941 599 ntBASIC10.65□□□□□ -0.7
LINC01546A6NGU7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 KRT8P14-201ENST00000414254 1442 ntBASIC10.65□□□□□ -0.7
LINC01546A6NGU7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 Z97205.2-201ENST00000564697 1639 ntBASIC10.65□□□□□ -0.7
LINC01546A6NGU7 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
LINC01546A6NGU7 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC01546A6NGU7 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC01546A6NGU7 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
LINC01546A6NGU7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
LINC01546A6NGU7 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC01546A6NGU7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC10.65□□□□□ -0.71
LINC01546A6NGU7 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC10.65□□□□□ -0.71
LINC01546A6NGU7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 MARK2P9-201ENST00000430958 1727 ntBASIC10.64□□□□□ -0.71
LINC01546A6NGU7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 BCAR1-209ENST00000546196 1340 ntBASIC10.64□□□□□ -0.71
LINC01546A6NGU7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 AC004066.1-201ENST00000502488 802 ntBASIC10.64□□□□□ -0.71
LINC01546A6NGU7 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 AC009474.1-201ENST00000455096 1565 ntBASIC10.64□□□□□ -0.71
LINC01546A6NGU7 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 AL157996.1-201ENST00000624684 2299 ntBASIC10.64□□□□□ -0.71
LINC01546A6NGU7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms