Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 AC106872.11-201ENST00000605838 421 ntBASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 AL358472.3-201ENST00000608147 415 ntBASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 AC020658.6-201ENST00000623564 1870 ntBASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3BA6NDS4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 AC020910.5-201ENST00000623668 1865 ntBASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 CYP46A4P-201ENST00000414953 267 ntBASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 TUBB8P8-201ENST00000458717 1058 ntBASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 AC106794.1-201ENST00000506935 792 ntBASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 AC100827.2-201ENST00000563214 1194 ntBASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3BA6NDS4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 AL008707.1-201ENST00000422498 534 ntBASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 RN7SL163P-201ENST00000583100 276 ntBASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 AC138696.2-201ENST00000607376 223 ntBASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms