Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCHNA4D1U4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.08■□□□□ 0.16
LCHNA4D1U4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCHNA4D1U4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCHNA4D1U4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCHNA4D1U4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 FAM58BP-201ENST00000439056 645 ntBASIC16.07■□□□□ 0.16
LCHNA4D1U4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 AP002803.1-201ENST00000528836 498 ntBASIC16.07■□□□□ 0.16
LCHNA4D1U4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 AC007881.3-201ENST00000608897 607 ntBASIC16.07■□□□□ 0.16
LCHNA4D1U4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 Z98259.2-201ENST00000641583 609 ntBASIC16.07■□□□□ 0.16
LCHNA4D1U4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 AL137783.1-201ENST00000623494 1896 ntBASIC16.07■□□□□ 0.16
LCHNA4D1U4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.07■□□□□ 0.16
LCHNA4D1U4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 PAUPAR-201ENST00000630360 2965 ntBASIC16.07■□□□□ 0.16
LCHNA4D1U4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCHNA4D1U4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LCHNA4D1U4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 AL359258.3-201ENST00000622910 2331 ntBASIC16.06■□□□□ 0.16
LCHNA4D1U4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 AP005117.1-202ENST00000581724 1908 ntBASIC16.06■□□□□ 0.16
LCHNA4D1U4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 KRT8P21-201ENST00000430398 1491 ntBASIC16.06■□□□□ 0.16
LCHNA4D1U4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 RN7SKP230-201ENST00000365642 335 ntBASIC16.06■□□□□ 0.16
LCHNA4D1U4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 AC012441.2-201ENST00000444843 739 ntBASIC16.06■□□□□ 0.16
LCHNA4D1U4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 MIR6756-201ENST00000616240 63 ntBASIC16.06■□□□□ 0.16
LCHNA4D1U4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCHNA4D1U4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.06■□□□□ 0.16
LCHNA4D1U4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCHNA4D1U4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.05■□□□□ 0.16
LCHNA4D1U4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCHNA4D1U4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms