Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC21.98■■□□□ 1.11
HFM1A2PYH4 AC026740.1-201ENST00000607068 791 ntBASIC21.98■■□□□ 1.11
HFM1A2PYH4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC21.98■■□□□ 1.11
HFM1A2PYH4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC21.98■■□□□ 1.11
HFM1A2PYH4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC21.98■■□□□ 1.11
HFM1A2PYH4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC21.98■■□□□ 1.11
HFM1A2PYH4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC21.98■■□□□ 1.11
HFM1A2PYH4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
HFM1A2PYH4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HFM1A2PYH4 AC092506.1-202ENST00000401022 528 ntBASIC21.97■■□□□ 1.11
HFM1A2PYH4 AC078875.1-201ENST00000431907 724 ntBASIC21.97■■□□□ 1.11
HFM1A2PYH4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HFM1A2PYH4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
HFM1A2PYH4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
HFM1A2PYH4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
HFM1A2PYH4 R3HDM2P2-201ENST00000401880 2116 ntBASIC21.97■■□□□ 1.11
HFM1A2PYH4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HFM1A2PYH4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HFM1A2PYH4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HFM1A2PYH4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
HFM1A2PYH4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HFM1A2PYH4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HFM1A2PYH4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HFM1A2PYH4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HFM1A2PYH4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
HFM1A2PYH4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 SNORD3B-2-202ENST00000571722 791 ntBASIC21.97■■□□□ 1.11
HFM1A2PYH4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 AC244452.3-201ENST00000636814 210 ntBASIC21.97■■□□□ 1.11
HFM1A2PYH4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC21.97■■□□□ 1.11
HFM1A2PYH4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
HFM1A2PYH4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC21.96■■□□□ 1.11
HFM1A2PYH4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 AC006504.5-208ENST00000588784 2401 ntBASIC21.96■■□□□ 1.11
HFM1A2PYH4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 AC005740.2-201ENST00000511085 419 ntBASIC21.96■■□□□ 1.11
HFM1A2PYH4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC21.96■■□□□ 1.11
HFM1A2PYH4 AC106872.11-201ENST00000605838 421 ntBASIC21.96■■□□□ 1.11
HFM1A2PYH4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC21.96■■□□□ 1.11
HFM1A2PYH4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
HFM1A2PYH4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC21.96■■□□□ 1.11
HFM1A2PYH4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HFM1A2PYH4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
HFM1A2PYH4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
HFM1A2PYH4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
HFM1A2PYH4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HFM1A2PYH4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC21.95■■□□□ 1.1
HFM1A2PYH4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HFM1A2PYH4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
HFM1A2PYH4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HFM1A2PYH4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HFM1A2PYH4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC21.95■■□□□ 1.1
HFM1A2PYH4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HFM1A2PYH4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HFM1A2PYH4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HFM1A2PYH4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HFM1A2PYH4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HFM1A2PYH4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms