Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 CNN2P8-201ENST00000421872 913 ntBASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 PFN1P12-201ENST00000455938 534 ntBASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 AC004066.1-201ENST00000502488 802 ntBASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 MIR4525-201ENST00000580000 75 ntBASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 AC145423.3-201ENST00000615987 467 ntBASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 AC132938.4-201ENST00000623835 848 ntBASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 AC008687.7-202ENST00000637404 953 ntBASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.95□□□□□ -0.5
TSSC4Q9Y5U2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 AL645937.2-201ENST00000396808 931 ntBASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TSSC4Q9Y5U2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms