Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 RN7SKP214-201ENST00000364208 315 ntBASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 AC007274.2-201ENST00000421675 662 ntBASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 AC012441.2-201ENST00000444843 739 ntBASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 AL596276.2-201ENST00000447525 331 ntBASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 AC008805.1-201ENST00000590892 364 ntBASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 AC079336.7-201ENST00000623428 1078 ntBASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 AC006058.4-201ENST00000624016 1670 ntBASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 LILRP1-201ENST00000444199 1370 ntBASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 FXNP2-201ENST00000411625 547 ntBASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 FTLP1-201ENST00000449155 526 ntBASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 EEF1DP6-201ENST00000449232 372 ntBASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 MPRIPP1-201ENST00000452433 1089 ntBASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 MIR4706-201ENST00000582134 82 ntBASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 AC132192.2-201ENST00000596206 1147 ntBASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 NAP1L6-202ENST00000641404 1222 ntBASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 AL008718.2-201ENST00000609206 1313 ntBASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB7Q9Y5E2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB7Q9Y5E2 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB7Q9Y5E2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB7Q9Y5E2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB7Q9Y5E2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB7Q9Y5E2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB7Q9Y5E2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHB7Q9Y5E2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB7Q9Y5E2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB7Q9Y5E2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB7Q9Y5E2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB7Q9Y5E2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB7Q9Y5E2 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB7Q9Y5E2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB7Q9Y5E2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms