Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 HLA-H-201ENST00000383620 1096 ntBASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 AL049840.3-201ENST00000602669 611 ntBASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 AL445228.2-201ENST00000605589 952 ntBASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 AC008267.7-201ENST00000624570 1194 ntBASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.45□□□□□ -0.42
RCL1Q9Y2P8 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 AC018845.2-201ENST00000568326 409 ntBASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 AP002472.1-201ENST00000577490 586 ntBASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 AL121912.1-201ENST00000603683 238 ntBASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 PPT1-213ENST00000641319 2388 ntBASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.44□□□□□ -0.42
RCL1Q9Y2P8 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms