Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AL590440.2-201ENST00000641973 1595 ntBASIC20.47■□□□□ 0.87
NINLQ9Y2I6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 AC091046.1-201ENST00000331871 207 ntBASIC20.46■□□□□ 0.87
NINLQ9Y2I6 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 NPPA-201ENST00000376476 728 ntTSL 3 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 AC234644.1-201ENST00000406065 370 ntBASIC20.46■□□□□ 0.87
NINLQ9Y2I6 PTPA-215ENST00000432124 567 ntTSL 4 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 AC021723.1-201ENST00000486306 515 ntBASIC20.46■□□□□ 0.87
NINLQ9Y2I6 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 PCBP2-OT1-201ENST00000634357 590 ntBASIC20.46■□□□□ 0.87
NINLQ9Y2I6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 AC004899.1-201ENST00000424687 1714 ntBASIC20.46■□□□□ 0.87
NINLQ9Y2I6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 AC007292.2-201ENST00000593524 1812 ntBASIC20.46■□□□□ 0.87
NINLQ9Y2I6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 MPV17-204ENST00000399052 749 ntTSL 4 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 DEF8-202ENST00000418391 852 ntTSL 2 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 AC012441.2-201ENST00000444843 739 ntBASIC20.46■□□□□ 0.87
NINLQ9Y2I6 OARD1-204ENST00000464633 717 ntTSL 2 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 SDHD-202ENST00000525291 790 ntTSL 3 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
NINLQ9Y2I6 AC100757.4-201ENST00000626934 759 ntBASIC20.46■□□□□ 0.87
NINLQ9Y2I6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
NINLQ9Y2I6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 AC244394.1-201ENST00000435000 1665 ntBASIC20.45■□□□□ 0.86
NINLQ9Y2I6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 AC103702.1-201ENST00000548801 2630 ntBASIC20.45■□□□□ 0.86
NINLQ9Y2I6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 AC008267.1-201ENST00000474858 1069 ntBASIC20.45■□□□□ 0.86
NINLQ9Y2I6 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC20.45■□□□□ 0.86
NINLQ9Y2I6 AC004923.1-202ENST00000642106 209 ntBASIC20.45■□□□□ 0.86
NINLQ9Y2I6 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms