Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 RPL37AP1-201ENST00000412502 279 ntBASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 AC136604.1-201ENST00000418535 575 ntBASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 AC051619.7-201ENST00000568314 623 ntBASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 AL138828.2-201ENST00000615812 383 ntBASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 AL033527.5-202ENST00000641632 1098 ntBASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.16□□□□□ -0.62
HHLA3Q9XRX5 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 MIR943-201ENST00000401286 94 ntBASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 AL645939.2-201ENST00000427340 991 ntBASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 IGHV3-42-201ENST00000520410 361 ntBASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms