Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 FAM86HP-204ENST00000513466 959 ntBASIC14.26□□□□□ -0.13
CTSFQ9UBX1 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 DUX4L47-201ENST00000566374 394 ntBASIC14.26□□□□□ -0.13
CTSFQ9UBX1 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 AP000845.1-201ENST00000581677 2131 ntBASIC14.26□□□□□ -0.13
CTSFQ9UBX1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSFQ9UBX1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 NORAD-201ENST00000565493 5339 ntBASIC14.25□□□□□ -0.13
CTSFQ9UBX1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 AP006547.1-201ENST00000563435 692 ntBASIC14.25□□□□□ -0.13
CTSFQ9UBX1 MIR4525-201ENST00000580000 75 ntBASIC14.25□□□□□ -0.13
CTSFQ9UBX1 OR10B1P-201ENST00000601666 907 ntBASIC14.25□□□□□ -0.13
CTSFQ9UBX1 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 AL603764.1-201ENST00000636452 321 ntBASIC14.25□□□□□ -0.13
CTSFQ9UBX1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 AC126365.1-201ENST00000578585 1514 ntBASIC14.25□□□□□ -0.13
CTSFQ9UBX1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSFQ9UBX1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSFQ9UBX1 AC144831.1-201ENST00000573312 2656 ntBASIC14.24□□□□□ -0.13
CTSFQ9UBX1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms