Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AL360270.3-201ENST00000609118 1348 ntBASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 AC022616.1-201ENST00000518688 554 ntBASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 AC068587.3-201ENST00000526613 355 ntBASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SDHAF3Q9NRP4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SDHAF3Q9NRP4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SDHAF3Q9NRP4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.96□□□□□ -0.18
SDHAF3Q9NRP4 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SDHAF3Q9NRP4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SDHAF3Q9NRP4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
SDHAF3Q9NRP4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SDHAF3Q9NRP4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SDHAF3Q9NRP4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SDHAF3Q9NRP4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SDHAF3Q9NRP4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
SDHAF3Q9NRP4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SDHAF3Q9NRP4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SDHAF3Q9NRP4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.96□□□□□ -0.18
SDHAF3Q9NRP4 REXO1L4P-201ENST00000605109 1937 ntBASIC13.96□□□□□ -0.18
SDHAF3Q9NRP4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 KLF2P2-201ENST00000416807 1039 ntBASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 AC012441.1-201ENST00000446669 685 ntBASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 GAPDHP21-201ENST00000450301 1010 ntBASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 GIMAP3P-201ENST00000495150 836 ntBASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 MIR5189-201ENST00000577370 114 ntBASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 KRT8P14-201ENST00000414254 1442 ntBASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SDHAF3Q9NRP4 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHAF3Q9NRP4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms