Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 TLE1P1-201ENST00000422965 589 ntBASIC15.13■□□□□ 0.01
MRM3Q9HC36 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 AL162726.2-201ENST00000438986 1017 ntBASIC15.13■□□□□ 0.01
MRM3Q9HC36 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 AP001063.1-201ENST00000568332 529 ntBASIC15.13■□□□□ 0.01
MRM3Q9HC36 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 AC239800.4-201ENST00000603712 296 ntBASIC15.13■□□□□ 0.01
MRM3Q9HC36 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.13■□□□□ 0.01
MRM3Q9HC36 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRM3Q9HC36 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 CLUHP6-201ENST00000580789 941 ntBASIC15.12■□□□□ 0.01
MRM3Q9HC36 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.12■□□□□ 0.01
MRM3Q9HC36 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRM3Q9HC36 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MRM3Q9HC36 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.11■□□□□ 0.01
MRM3Q9HC36 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRM3Q9HC36 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MRM3Q9HC36 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
MRM3Q9HC36 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
MRM3Q9HC36 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRM3Q9HC36 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRM3Q9HC36 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRM3Q9HC36 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRM3Q9HC36 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms