Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 EEF1DP4-201ENST00000446006 880 ntBASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 IGHV3-22-201ENST00000520721 359 ntBASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 HNRNPUP1-201ENST00000554987 333 ntBASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 AC026979.3-201ENST00000607315 403 ntBASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 Z83851.2-201ENST00000609564 659 ntBASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 AP001267.2-201ENST00000532619 2086 ntBASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 AC011474.4-201ENST00000623523 2076 ntBASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 MST1P2-201ENST00000457982 2291 ntBASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 FAM220BP-201ENST00000377689 816 ntBASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 AC079781.3-201ENST00000449110 356 ntBASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 AC074386.1-202ENST00000463561 864 ntBASIC10.21□□□□□ -0.77
SND1-IT1Q9HBX3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC10.21□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms