Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.79■□□□□ 0.12
SMOQ99835 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.79■□□□□ 0.12
SMOQ99835 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.79■□□□□ 0.12
SMOQ99835 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SMOQ99835 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 CICP23-201ENST00000605013 2741 ntBASIC15.79■□□□□ 0.12
SMOQ99835 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SMOQ99835 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SMOQ99835 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 GOLGA2P4-201ENST00000441462 777 ntBASIC15.79■□□□□ 0.12
SMOQ99835 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.79■□□□□ 0.12
SMOQ99835 FAM86HP-204ENST00000513466 959 ntBASIC15.79■□□□□ 0.12
SMOQ99835 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.79■□□□□ 0.12
SMOQ99835 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.79■□□□□ 0.12
SMOQ99835 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.79■□□□□ 0.12
SMOQ99835 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.79■□□□□ 0.12
SMOQ99835 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.79■□□□□ 0.12
SMOQ99835 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.79■□□□□ 0.12
SMOQ99835 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.79■□□□□ 0.12
SMOQ99835 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.79■□□□□ 0.12
SMOQ99835 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SMOQ99835 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
SMOQ99835 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
SMOQ99835 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SMOQ99835 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 SALL4P5-201ENST00000419001 1760 ntBASIC15.79■□□□□ 0.12
SMOQ99835 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.79■□□□□ 0.12
SMOQ99835 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.79■□□□□ 0.12
SMOQ99835 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.79■□□□□ 0.12
SMOQ99835 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.79■□□□□ 0.12
SMOQ99835 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
SMOQ99835 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.78■□□□□ 0.12
SMOQ99835 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SMOQ99835 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SMOQ99835 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.78■□□□□ 0.12
SMOQ99835 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.78■□□□□ 0.12
SMOQ99835 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SMOQ99835 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 AL136309.1-201ENST00000403917 691 ntBASIC15.78■□□□□ 0.12
SMOQ99835 TLE1P1-201ENST00000422965 589 ntBASIC15.78■□□□□ 0.12
SMOQ99835 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SMOQ99835 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 HIST2H2BB-201ENST00000449108 381 ntBASIC15.78■□□□□ 0.12
SMOQ99835 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.78■□□□□ 0.12
SMOQ99835 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.78■□□□□ 0.12
SMOQ99835 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.78■□□□□ 0.12
SMOQ99835 EEF1DP1-201ENST00000585891 896 ntBASIC15.78■□□□□ 0.12
SMOQ99835 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.78■□□□□ 0.12
SMOQ99835 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.78■□□□□ 0.12
SMOQ99835 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.78■□□□□ 0.12
SMOQ99835 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.78■□□□□ 0.12
SMOQ99835 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SMOQ99835 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMOQ99835 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.78■□□□□ 0.12
SMOQ99835 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SMOQ99835 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SMOQ99835 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.77■□□□□ 0.12
SMOQ99835 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms