Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
LITAFQ99732 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
LITAFQ99732 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
LITAFQ99732 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC10.07□□□□□ -0.8
LITAFQ99732 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
LITAFQ99732 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LITAFQ99732 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC10.07□□□□□ -0.8
LITAFQ99732 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC10.07□□□□□ -0.8
LITAFQ99732 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC10.07□□□□□ -0.8
LITAFQ99732 KHSRPP1-201ENST00000427983 1768 ntBASIC10.07□□□□□ -0.8
LITAFQ99732 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.07□□□□□ -0.8
LITAFQ99732 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
LITAFQ99732 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LITAFQ99732 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
LITAFQ99732 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 AKR1C7P-201ENST00000305623 895 ntBASIC10.07□□□□□ -0.8
LITAFQ99732 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC10.07□□□□□ -0.8
LITAFQ99732 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
LITAFQ99732 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC10.07□□□□□ -0.8
LITAFQ99732 ISCU-203ENST00000431221 799 ntTSL 2 BASIC10.07□□□□□ -0.8
LITAFQ99732 VN2R19P-201ENST00000442399 1052 ntBASIC10.07□□□□□ -0.8
LITAFQ99732 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.07□□□□□ -0.8
LITAFQ99732 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC10.07□□□□□ -0.8
LITAFQ99732 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC10.07□□□□□ -0.8
LITAFQ99732 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 AC012640.2-201ENST00000561606 901 ntBASIC10.07□□□□□ -0.8
LITAFQ99732 AC096734.2-201ENST00000562054 433 ntBASIC10.07□□□□□ -0.8
LITAFQ99732 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC10.07□□□□□ -0.8
LITAFQ99732 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC10.07□□□□□ -0.8
LITAFQ99732 TBCB-211ENST00000589996 724 ntTSL 3 BASIC10.07□□□□□ -0.8
LITAFQ99732 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.07□□□□□ -0.8
LITAFQ99732 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC10.07□□□□□ -0.8
LITAFQ99732 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 AL365181.3-201ENST00000605886 3222 ntBASIC10.07□□□□□ -0.8
LITAFQ99732 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC10.07□□□□□ -0.8
LITAFQ99732 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.07□□□□□ -0.8
LITAFQ99732 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LITAFQ99732 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC10.07□□□□□ -0.8
LITAFQ99732 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC10.07□□□□□ -0.8
LITAFQ99732 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC10.07□□□□□ -0.8
LITAFQ99732 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LITAFQ99732 BSG-215ENST00000618006 1329 ntTSL 2 BASIC10.07□□□□□ -0.8
LITAFQ99732 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 NCLP1-201ENST00000445357 1963 ntBASIC10.06□□□□□ -0.8
LITAFQ99732 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC10.06□□□□□ -0.8
LITAFQ99732 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
LITAFQ99732 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LITAFQ99732 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LITAFQ99732 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC10.06□□□□□ -0.8
LITAFQ99732 CLK3P2-201ENST00000427566 1453 ntBASIC10.06□□□□□ -0.8
LITAFQ99732 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
LITAFQ99732 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LITAFQ99732 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms