Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.9□□□□□ -0.18
SNX18Q96RF0 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 TREML5P-201ENST00000421694 576 ntBASIC13.9□□□□□ -0.18
SNX18Q96RF0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 HLA-V-204ENST00000476601 1289 ntBASIC13.9□□□□□ -0.18
SNX18Q96RF0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 AL390754.1-201ENST00000619088 582 ntBASIC13.9□□□□□ -0.18
SNX18Q96RF0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNX18Q96RF0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SNX18Q96RF0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
SNX18Q96RF0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SNX18Q96RF0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SNX18Q96RF0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SNX18Q96RF0 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 AC104457.1-201ENST00000401024 814 ntBASIC13.89□□□□□ -0.19
SNX18Q96RF0 AC015922.1-201ENST00000421102 1152 ntBASIC13.89□□□□□ -0.19
SNX18Q96RF0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.89□□□□□ -0.19
SNX18Q96RF0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms