Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 AC132008.2-207ENST00000454517 770 ntBASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 PRYP6-201ENST00000514804 343 ntBASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 HNRNPUP1-201ENST00000554987 333 ntBASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB3IPQ96QF0 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RAB3IPQ96QF0 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB3IPQ96QF0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB3IPQ96QF0 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB3IPQ96QF0 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RAB3IPQ96QF0 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.83□□□□□ -0.03
RAB3IPQ96QF0 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
RAB3IPQ96QF0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RAB3IPQ96QF0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.83□□□□□ -0.03
RAB3IPQ96QF0 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB3IPQ96QF0 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 RPS8P6-201ENST00000426177 609 ntBASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 AC109635.5-201ENST00000533593 962 ntBASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 ACTL9-202ENST00000612068 1252 ntBASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 FAM90A12P-201ENST00000519497 2375 ntBASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 FAM90A24P-201ENST00000520792 2369 ntBASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB3IPQ96QF0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms