Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC7Q96M83 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC7Q96M83 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC7Q96M83 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC7Q96M83 AC145423.3-201ENST00000615987 467 ntBASIC20.97■□□□□ 0.95
CCDC7Q96M83 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC7Q96M83 API5-203ENST00000455725 2257 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC7Q96M83 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC7Q96M83 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC7Q96M83 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC7Q96M83 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC7Q96M83 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC7Q96M83 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC7Q96M83 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC7Q96M83 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC7Q96M83 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC7Q96M83 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC7Q96M83 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC7Q96M83 CNN2P8-201ENST00000421872 913 ntBASIC20.96■□□□□ 0.95
CCDC7Q96M83 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC7Q96M83 KRT8P13-201ENST00000463294 1010 ntBASIC20.96■□□□□ 0.95
CCDC7Q96M83 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC7Q96M83 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC7Q96M83 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC7Q96M83 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC7Q96M83 LARP4-220ENST00000615080 856 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC7Q96M83 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC7Q96M83 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC7Q96M83 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC7Q96M83 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC20.95■□□□□ 0.95
CCDC7Q96M83 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC7Q96M83 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC7Q96M83 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC20.95■□□□□ 0.95
CCDC7Q96M83 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 FES-203ENST00000394302 2133 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC7Q96M83 AC023908.3-201ENST00000564211 3047 ntBASIC20.95■□□□□ 0.94
CCDC7Q96M83 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 AC003102.2-201ENST00000589195 1469 ntBASIC20.95■□□□□ 0.94
CCDC7Q96M83 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC7Q96M83 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC7Q96M83 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CCDC7Q96M83 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC7Q96M83 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC7Q96M83 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC7Q96M83 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC7Q96M83 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC7Q96M83 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC7Q96M83 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC7Q96M83 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC7Q96M83 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC7Q96M83 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC7Q96M83 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC7Q96M83 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC7Q96M83 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC7Q96M83 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 AP001267.2-201ENST00000532619 2086 ntBASIC20.94■□□□□ 0.94
CCDC7Q96M83 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 RN7SKP230-201ENST00000365642 335 ntBASIC20.94■□□□□ 0.94
CCDC7Q96M83 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC7Q96M83 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC7Q96M83 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC7Q96M83 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC7Q96M83 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC7Q96M83 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC7Q96M83 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC7Q96M83 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 AC091271.1-201ENST00000611877 1162 ntBASIC20.94■□□□□ 0.94
CCDC7Q96M83 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC7Q96M83 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC7Q96M83 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC7Q96M83 AC005912.2-201ENST00000619492 2400 ntBASIC20.93■□□□□ 0.94
CCDC7Q96M83 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms