Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX27Q96L92 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX27Q96L92 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SNX27Q96L92 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX27Q96L92 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SNX27Q96L92 AL662890.1-201ENST00000396818 632 ntBASIC16.28■□□□□ 0.2
SNX27Q96L92 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX27Q96L92 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.28■□□□□ 0.2
SNX27Q96L92 AC006033.1-201ENST00000440505 426 ntBASIC16.28■□□□□ 0.2
SNX27Q96L92 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX27Q96L92 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SNX27Q96L92 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.28■□□□□ 0.2
SNX27Q96L92 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX27Q96L92 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SNX27Q96L92 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SNX27Q96L92 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 AC023090.2-201ENST00000625182 2110 ntBASIC16.28■□□□□ 0.2
SNX27Q96L92 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX27Q96L92 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SNX27Q96L92 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX27Q96L92 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX27Q96L92 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX27Q96L92 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.27■□□□□ 0.2
SNX27Q96L92 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SNX27Q96L92 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.27■□□□□ 0.2
SNX27Q96L92 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX27Q96L92 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX27Q96L92 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.27■□□□□ 0.2
SNX27Q96L92 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.27■□□□□ 0.2
SNX27Q96L92 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX27Q96L92 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNX27Q96L92 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNX27Q96L92 AL136309.1-201ENST00000403917 691 ntBASIC16.27■□□□□ 0.2
SNX27Q96L92 MTX1P1-201ENST00000440904 838 ntBASIC16.27■□□□□ 0.2
SNX27Q96L92 RPSAP36-202ENST00000494591 1261 ntBASIC16.27■□□□□ 0.2
SNX27Q96L92 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
SNX27Q96L92 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNX27Q96L92 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.27■□□□□ 0.2
SNX27Q96L92 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX27Q96L92 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.27■□□□□ 0.2
SNX27Q96L92 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.27■□□□□ 0.2
SNX27Q96L92 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.27■□□□□ 0.2
SNX27Q96L92 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNX27Q96L92 AC011840.2-201ENST00000563063 1520 ntBASIC16.27■□□□□ 0.2
SNX27Q96L92 AC015818.8-201ENST00000587907 1519 ntBASIC16.27■□□□□ 0.2
SNX27Q96L92 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX27Q96L92 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNX27Q96L92 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SNX27Q96L92 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.2
SNX27Q96L92 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNX27Q96L92 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNX27Q96L92 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SNX27Q96L92 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SNX27Q96L92 AC091951.1-201ENST00000512854 2465 ntBASIC16.27■□□□□ 0.19
SNX27Q96L92 KRT8P4-201ENST00000509735 1454 ntBASIC16.27■□□□□ 0.19
SNX27Q96L92 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SNX27Q96L92 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.27■□□□□ 0.19
SNX27Q96L92 AC006486.2-201ENST00000624246 2199 ntBASIC16.27■□□□□ 0.19
SNX27Q96L92 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.27■□□□□ 0.19
SNX27Q96L92 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.27■□□□□ 0.19
SNX27Q96L92 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.27■□□□□ 0.19
SNX27Q96L92 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNX27Q96L92 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNX27Q96L92 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SNX27Q96L92 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNX27Q96L92 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNX27Q96L92 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SNX27Q96L92 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SNX27Q96L92 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.26■□□□□ 0.19
SNX27Q96L92 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SNX27Q96L92 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.26■□□□□ 0.19
SNX27Q96L92 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.26■□□□□ 0.19
SNX27Q96L92 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SNX27Q96L92 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SNX27Q96L92 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.26■□□□□ 0.19
SNX27Q96L92 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.26■□□□□ 0.19
SNX27Q96L92 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNX27Q96L92 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms