Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 AC140113.2-201ENST00000604370 208 ntBASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 AC068137.2-201ENST00000605408 478 ntBASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 AC027601.4-201ENST00000611259 610 ntBASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 BX640515.1-201ENST00000617215 977 ntBASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 KRT8P22-201ENST00000562317 1415 ntBASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 AC138969.2-201ENST00000532739 9932 ntBASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 KRT18P3-201ENST00000451602 1288 ntBASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 SPTSSB-204ENST00000617024 1292 ntBASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 AL122018.1-201ENST00000446607 2310 ntBASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP6Q96FZ7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 AC140658.5-201ENST00000438532 169 ntBASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 AC074386.1-202ENST00000463561 864 ntBASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.31■□□□□ 0.04
CHMP6Q96FZ7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms