Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CPNE2Q96FN4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.27□□□□□ -0.28
CPNE2Q96FN4 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CPNE2Q96FN4 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.27□□□□□ -0.29
CPNE2Q96FN4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 AC074044.1-201ENST00000609673 707 ntBASIC13.27□□□□□ -0.29
CPNE2Q96FN4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 AC005252.3-201ENST00000623855 2258 ntBASIC13.27□□□□□ -0.29
CPNE2Q96FN4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.27□□□□□ -0.29
CPNE2Q96FN4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 AL080243.2-201ENST00000418783 582 ntBASIC13.26□□□□□ -0.29
CPNE2Q96FN4 ACE3P-201ENST00000423435 1973 ntBASIC13.26□□□□□ -0.29
CPNE2Q96FN4 GPS2P2-201ENST00000430745 888 ntBASIC13.26□□□□□ -0.29
CPNE2Q96FN4 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 AL512356.2-201ENST00000546955 174 ntBASIC13.26□□□□□ -0.29
CPNE2Q96FN4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 MIR4453-201ENST00000584019 89 ntBASIC13.26□□□□□ -0.29
CPNE2Q96FN4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms