Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 HLA-DMA-203ENST00000395305 777 ntBASIC17.39■□□□□ 0.37
CDCA5Q96FF9 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 AC138466.5-201ENST00000624002 808 ntBASIC17.39■□□□□ 0.37
CDCA5Q96FF9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 LILRP1-201ENST00000444199 1370 ntBASIC17.39■□□□□ 0.37
CDCA5Q96FF9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA5Q96FF9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 AC010491.1-201ENST00000563101 2797 ntBASIC17.38■□□□□ 0.37
CDCA5Q96FF9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 PSMD4P1-201ENST00000433951 1109 ntBASIC17.38■□□□□ 0.37
CDCA5Q96FF9 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 LINC00634-202ENST00000505157 222 ntBASIC17.38■□□□□ 0.37
CDCA5Q96FF9 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 DBP-202ENST00000593500 712 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17.38■□□□□ 0.37
CDCA5Q96FF9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 BCAS2P2-201ENST00000425064 674 ntBASIC17.37■□□□□ 0.37
CDCA5Q96FF9 DUX4L50-201ENST00000455245 715 ntBASIC17.37■□□□□ 0.37
CDCA5Q96FF9 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.37■□□□□ 0.37
CDCA5Q96FF9 AC024293.1-201ENST00000467930 498 ntBASIC17.37■□□□□ 0.37
CDCA5Q96FF9 RN7SL396P-201ENST00000471086 295 ntBASIC17.37■□□□□ 0.37
CDCA5Q96FF9 AREG-202ENST00000502307 956 ntTSL 5 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 AC131206.1-201ENST00000538078 1211 ntBASIC17.37■□□□□ 0.37
CDCA5Q96FF9 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms