Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 KRT8P14-201ENST00000414254 1442 ntBASIC16.04■□□□□ 0.16
TRIM11Q96F44 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 C1QBPP1-201ENST00000400117 770 ntBASIC16.04■□□□□ 0.16
TRIM11Q96F44 DFFBP1-201ENST00000433250 979 ntBASIC16.04■□□□□ 0.16
TRIM11Q96F44 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.04■□□□□ 0.16
TRIM11Q96F44 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 AC092183.1-201ENST00000469884 875 ntBASIC16.04■□□□□ 0.16
TRIM11Q96F44 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 INGX-202ENST00000489074 768 ntBASIC16.04■□□□□ 0.16
TRIM11Q96F44 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM11Q96F44 AC007326.2-201ENST00000624224 7579 ntBASIC16.04■□□□□ 0.16
TRIM11Q96F44 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM11Q96F44 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 AL391825.1-201ENST00000457671 1364 ntBASIC16.03■□□□□ 0.16
TRIM11Q96F44 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 AL365209.1-201ENST00000624418 6473 ntBASIC16.03■□□□□ 0.16
TRIM11Q96F44 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 GNAQP1-201ENST00000444815 1067 ntBASIC16.03■□□□□ 0.16
TRIM11Q96F44 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 INTS4P1-203ENST00000641008 3683 ntBASIC16.03■□□□□ 0.16
TRIM11Q96F44 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms