Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 KRT18P34-201ENST00000488218 1270 ntBASIC14.04□□□□□ -0.16
HPS1Q92902 AC069335.1-201ENST00000489972 472 ntBASIC14.04□□□□□ -0.16
HPS1Q92902 KRT8P48-201ENST00000515599 1220 ntBASIC14.04□□□□□ -0.16
HPS1Q92902 RNA5SP421-201ENST00000516864 134 ntBASIC14.04□□□□□ -0.16
HPS1Q92902 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.04□□□□□ -0.16
HPS1Q92902 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.04□□□□□ -0.16
HPS1Q92902 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.04□□□□□ -0.16
HPS1Q92902 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.04□□□□□ -0.16
HPS1Q92902 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
HPS1Q92902 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.04□□□□□ -0.16
HPS1Q92902 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
HPS1Q92902 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.04□□□□□ -0.16
HPS1Q92902 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.04□□□□□ -0.16
HPS1Q92902 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.04□□□□□ -0.16
HPS1Q92902 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HPS1Q92902 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HPS1Q92902 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HPS1Q92902 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HPS1Q92902 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HPS1Q92902 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.03□□□□□ -0.16
HPS1Q92902 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.03□□□□□ -0.16
HPS1Q92902 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.03□□□□□ -0.16
HPS1Q92902 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.03□□□□□ -0.16
HPS1Q92902 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 AC092474.2-201ENST00000424288 719 ntBASIC14.03□□□□□ -0.16
HPS1Q92902 KRT18P32-201ENST00000424695 1287 ntBASIC14.03□□□□□ -0.16
HPS1Q92902 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.03□□□□□ -0.16
HPS1Q92902 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.03□□□□□ -0.16
HPS1Q92902 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.03□□□□□ -0.16
HPS1Q92902 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC14.03□□□□□ -0.16
HPS1Q92902 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.03□□□□□ -0.16
HPS1Q92902 AC093520.2-201ENST00000561830 333 ntBASIC14.03□□□□□ -0.16
HPS1Q92902 AL135744.1-201ENST00000565098 629 ntBASIC14.03□□□□□ -0.16
HPS1Q92902 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.03□□□□□ -0.16
HPS1Q92902 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.03□□□□□ -0.16
HPS1Q92902 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.03□□□□□ -0.16
HPS1Q92902 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.03□□□□□ -0.16
HPS1Q92902 AL391262.2-201ENST00000622466 494 ntBASIC14.03□□□□□ -0.16
HPS1Q92902 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 WASH6P-202ENST00000359512 1437 ntBASIC14.03□□□□□ -0.16
HPS1Q92902 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.03□□□□□ -0.16
HPS1Q92902 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.03□□□□□ -0.16
HPS1Q92902 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HPS1Q92902 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HPS1Q92902 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.03□□□□□ -0.16
HPS1Q92902 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HPS1Q92902 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HPS1Q92902 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.03□□□□□ -0.16
HPS1Q92902 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.03□□□□□ -0.16
HPS1Q92902 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 CICP11-201ENST00000434745 2827 ntBASIC14.03□□□□□ -0.16
HPS1Q92902 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HPS1Q92902 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 AL118506.1-201ENST00000601296 3082 ntBASIC14.03□□□□□ -0.16
HPS1Q92902 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HPS1Q92902 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.03□□□□□ -0.16
HPS1Q92902 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
HPS1Q92902 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
HPS1Q92902 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
HPS1Q92902 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
HPS1Q92902 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.02□□□□□ -0.16
HPS1Q92902 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HPS1Q92902 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms