Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.08■□□□□ 0.01
CKAP2Q8WWK9 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CKAP2Q8WWK9 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.08■□□□□ 0.01
CKAP2Q8WWK9 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CKAP2Q8WWK9 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CKAP2Q8WWK9 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
CKAP2Q8WWK9 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CKAP2Q8WWK9 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CKAP2Q8WWK9 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CKAP2Q8WWK9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.08■□□□□ 0.01
CKAP2Q8WWK9 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CKAP2Q8WWK9 AC073548.1-201ENST00000624088 1882 ntBASIC15.08■□□□□ 0.01
CKAP2Q8WWK9 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 SPCS2P4-201ENST00000436160 681 ntBASIC15.08■□□□□ 0
CKAP2Q8WWK9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 Z83851.2-201ENST00000609564 659 ntBASIC15.08■□□□□ 0
CKAP2Q8WWK9 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 AL360270.3-201ENST00000609118 1348 ntBASIC15.08■□□□□ 0
CKAP2Q8WWK9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.08■□□□□ 0
CKAP2Q8WWK9 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKAP2Q8WWK9 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 KRT18P64-201ENST00000434946 1219 ntBASIC15.07■□□□□ 0
CKAP2Q8WWK9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 FAM86C2P-203ENST00000528684 1004 ntBASIC15.07■□□□□ 0
CKAP2Q8WWK9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 BANF1P1-201ENST00000553684 263 ntBASIC15.07■□□□□ 0
CKAP2Q8WWK9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.07■□□□□ 0
CKAP2Q8WWK9 AP001005.1-201ENST00000571755 1248 ntBASIC15.07■□□□□ 0
CKAP2Q8WWK9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.07■□□□□ 0
CKAP2Q8WWK9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.07■□□□□ 0
CKAP2Q8WWK9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms