Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 FO393414.2-201ENST00000405153 598 ntBASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 TARDBPP1-201ENST00000442013 1203 ntBASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 FAM197Y8-203ENST00000450145 560 ntBASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 KRT19P2-202ENST00000557173 1012 ntBASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 AC004877.2-201ENST00000623941 599 ntBASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 FAM215A-202ENST00000632077 792 ntBASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 AC114271.1-201ENST00000612689 2813 ntBASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 SLED1-202ENST00000512051 380 ntBASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 AC112191.1-201ENST00000523689 701 ntBASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 PRELID1P1-202ENST00000567272 903 ntBASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 AC083964.2-201ENST00000623988 2396 ntBASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM4Q8WVI0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 AL122018.1-201ENST00000446607 2310 ntBASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms