Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 AC026748.1-201ENST00000624349 3251 ntBASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 RPL5P21-201ENST00000404620 815 ntBASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 HLA-K-203ENST00000430151 1046 ntBASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 PPY2P-201ENST00000582808 702 ntBASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 AC073413.1-201ENST00000603927 732 ntBASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHKBP1Q8TBC3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 AC079178.1-201ENST00000420915 656 ntBASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 AC091804.1-201ENST00000486888 567 ntBASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 AL391280.1-201ENST00000506969 1062 ntBASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 RN7SL713P-201ENST00000582127 302 ntBASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 AC244452.3-201ENST00000636814 210 ntBASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms