Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 SDHAP3-202ENST00000515467 728 ntBASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 AC025048.3-201ENST00000590609 569 ntBASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 AC005702.4-201ENST00000618393 416 ntBASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
CFAP61Q8NHU2 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CFAP61Q8NHU2 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CFAP61Q8NHU2 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CFAP61Q8NHU2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CFAP61Q8NHU2 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.46■□□□□ 0.06
CFAP61Q8NHU2 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.46■□□□□ 0.06
CFAP61Q8NHU2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CFAP61Q8NHU2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CFAP61Q8NHU2 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CFAP61Q8NHU2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CFAP61Q8NHU2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 AC136604.1-201ENST00000418535 575 ntBASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 FAM8A3P-201ENST00000427218 844 ntBASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 AC004890.2-204ENST00000481968 304 ntBASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 RNA5SP421-201ENST00000516864 134 ntBASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 AF228730.6-201ENST00000641497 218 ntBASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 AC084121.3-201ENST00000641716 218 ntBASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms