Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 AC104581.4-201ENST00000623126 3052 ntBASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 WASH4P-201ENST00000564273 1246 ntBASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 AC005252.2-201ENST00000624630 1141 ntBASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SRFBP1Q8NEF9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 AC013726.1-201ENST00000563747 2285 ntBASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 TNRC18P2-201ENST00000417666 2714 ntBASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 LRRC59-203ENST00000576448 1531 ntBASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.48□□□□□ -0.09
SRFBP1Q8NEF9 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms