Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 AC124283.3-201ENST00000570869 594 ntBASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 ACE3P-201ENST00000423435 1973 ntBASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 AC005912.2-201ENST00000619492 2400 ntBASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 AC007787.1-201ENST00000588095 1583 ntBASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 AL391825.1-201ENST00000457671 1364 ntBASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 REXO1L5P-201ENST00000622260 2098 ntBASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
SIMC1Q8NDZ2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
SIMC1Q8NDZ2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.33□□□□□ -0.11
SIMC1Q8NDZ2 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SIMC1Q8NDZ2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.33□□□□□ -0.11
SIMC1Q8NDZ2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.33□□□□□ -0.11
SIMC1Q8NDZ2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
SIMC1Q8NDZ2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SIMC1Q8NDZ2 ZBED1P1-201ENST00000502364 1930 ntBASIC14.33□□□□□ -0.11
SIMC1Q8NDZ2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SIMC1Q8NDZ2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SIMC1Q8NDZ2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 CICP23-201ENST00000605013 2741 ntBASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 AC007686.3-201ENST00000619017 3487 ntBASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 AC120045.2-201ENST00000567334 178 ntBASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 SAMD11P1-201ENST00000571429 661 ntBASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 SPDYE22P-201ENST00000582158 798 ntBASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 WFDC1-204ENST00000613603 549 ntBASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 AC232323.1-201ENST00000540724 2099 ntBASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.33□□□□□ -0.12
SIMC1Q8NDZ2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIMC1Q8NDZ2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms