Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM43AQ8N2R8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM43AQ8N2R8 TCAF1P1-201ENST00000414990 2232 ntBASIC18.69■□□□□ 0.58
FAM43AQ8N2R8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM43AQ8N2R8 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
FAM43AQ8N2R8 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
FAM43AQ8N2R8 AL161772.1-201ENST00000610494 4412 ntBASIC18.69■□□□□ 0.58
FAM43AQ8N2R8 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM43AQ8N2R8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 KRT8P22-201ENST00000562317 1415 ntBASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 AC108725.1-201ENST00000495472 409 ntBASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 LINC01115-203ENST00000606068 577 ntBASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 AL031731.1-201ENST00000642131 2094 ntBASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 AC091951.1-201ENST00000512854 2465 ntBASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 TK2-221ENST00000620035 5060 ntTSL 2 BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 CYP4F24P-201ENST00000586049 1580 ntBASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM43AQ8N2R8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 AC069224.1-201ENST00000566372 1715 ntBASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 ACTG1P3-201ENST00000431775 1114 ntBASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 RNA5SP412-201ENST00000516234 123 ntBASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 TDH-203ENST00000531764 1110 ntBASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 CU634019.7-201ENST00000624153 1185 ntBASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 FP236241.2-201ENST00000624906 1185 ntBASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC18.67■□□□□ 0.58
FAM43AQ8N2R8 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 HAL-202ENST00000538703 2637 ntTSL 2 BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 AC004945.1-201ENST00000416738 983 ntBASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.66■□□□□ 0.58
FAM43AQ8N2R8 AC099548.2-209ENST00000480264 625 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms