Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 CETN4P-206ENST00000642099 2168 ntBASIC13.56□□□□□ -0.24
LRRC28Q86X40 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 AP001267.2-201ENST00000532619 2086 ntBASIC13.56□□□□□ -0.24
LRRC28Q86X40 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 AC004987.2-201ENST00000395959 1148 ntBASIC13.56□□□□□ -0.24
LRRC28Q86X40 AL512638.1-201ENST00000457493 794 ntBASIC13.56□□□□□ -0.24
LRRC28Q86X40 INGX-202ENST00000489074 768 ntBASIC13.56□□□□□ -0.24
LRRC28Q86X40 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 BANF1P1-201ENST00000553684 263 ntBASIC13.56□□□□□ -0.24
LRRC28Q86X40 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 AL589739.1-201ENST00000607720 493 ntBASIC13.56□□□□□ -0.24
LRRC28Q86X40 AL133215.2-201ENST00000609242 977 ntBASIC13.56□□□□□ -0.24
LRRC28Q86X40 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 AC107918.4-201ENST00000641966 3141 ntBASIC13.56□□□□□ -0.24
LRRC28Q86X40 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRC28Q86X40 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 CICP17-201ENST00000418553 2377 ntBASIC13.56□□□□□ -0.24
LRRC28Q86X40 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRC28Q86X40 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 AC241585.1-201ENST00000433527 519 ntBASIC13.55□□□□□ -0.24
LRRC28Q86X40 BCRP1-201ENST00000444246 691 ntBASIC13.55□□□□□ -0.24
LRRC28Q86X40 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 AL139010.1-201ENST00000454878 894 ntBASIC13.55□□□□□ -0.24
LRRC28Q86X40 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.55□□□□□ -0.24
LRRC28Q86X40 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRC28Q86X40 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms