Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 AL451050.2-201ENST00000606967 682 ntBASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 ACE3P-201ENST00000423435 1973 ntBASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE3BQ7Z3V4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 BCYRN1-201ENST00000418539 200 ntBASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 AC126915.1-201ENST00000522847 1038 ntBASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 AL139099.5-201ENST00000635274 300 ntBASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 AC022532.1-201ENST00000624563 1728 ntBASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.74■□□□□ 0.59
UBE3BQ7Z3V4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 AC091804.1-201ENST00000486888 567 ntBASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.73■□□□□ 0.59
UBE3BQ7Z3V4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms