Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 SDHAP3-202ENST00000515467 728 ntBASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 AL512361.1-201ENST00000554200 418 ntBASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 AC051619.7-201ENST00000568314 623 ntBASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 SPDYE12P-201ENST00000618416 771 ntBASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 AC007787.1-201ENST00000588095 1583 ntBASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.9□□□□□ -0.18
SMARCD3Q6STE5 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SMARCD3Q6STE5 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
SMARCD3Q6STE5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SMARCD3Q6STE5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SMARCD3Q6STE5 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 AC087386.2-201ENST00000623212 4637 ntBASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 AP006288.1-201ENST00000446065 395 ntBASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 AC010336.2-201ENST00000564226 506 ntBASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 AL109936.8-201ENST00000641772 604 ntBASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 AC131212.3-201ENST00000624087 4219 ntBASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
SMARCD3Q6STE5 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.88□□□□□ -0.19
SMARCD3Q6STE5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms