Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP4Q6PIL6 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 RBM17P3-201ENST00000417687 1192 ntBASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 MIR3180-1-201ENST00000580374 94 ntBASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 MIR3180-3-201ENST00000584616 94 ntBASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 AC073592.4-201ENST00000623827 446 ntBASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 AC138969.3-201ENST00000546612 1459 ntBASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 AC138932.2-201ENST00000548268 1459 ntBASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 AC126755.4-201ENST00000549796 1459 ntBASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP4Q6PIL6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 AC011481.3-201ENST00000623895 5594 ntBASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 BNIP3P1-202ENST00000550043 1585 ntBASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 AC018892.3-201ENST00000623986 2499 ntBASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms