Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTR9Q6PD62 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTR9Q6PD62 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTR9Q6PD62 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTR9Q6PD62 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTR9Q6PD62 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTR9Q6PD62 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTR9Q6PD62 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTR9Q6PD62 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 FAM8A4P-201ENST00000435433 1213 ntBASIC17.96■□□□□ 0.47
CTR9Q6PD62 AL355994.2-201ENST00000447882 704 ntBASIC17.96■□□□□ 0.47
CTR9Q6PD62 RPL13AP20-201ENST00000459725 609 ntBASIC17.96■□□□□ 0.47
CTR9Q6PD62 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 MESTP3-201ENST00000503460 968 ntBASIC17.96■□□□□ 0.47
CTR9Q6PD62 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 MIR6799-201ENST00000620297 69 ntBASIC17.96■□□□□ 0.47
CTR9Q6PD62 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTR9Q6PD62 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTR9Q6PD62 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 AC092384.3-202ENST00000564646 2873 ntBASIC17.96■□□□□ 0.47
CTR9Q6PD62 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CTR9Q6PD62 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 CNN2P10-201ENST00000443067 918 ntBASIC17.95■□□□□ 0.46
CTR9Q6PD62 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 AC092658.1-201ENST00000505836 891 ntBASIC17.95■□□□□ 0.46
CTR9Q6PD62 AL391280.1-201ENST00000506969 1062 ntBASIC17.95■□□□□ 0.46
CTR9Q6PD62 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 AC106820.3-201ENST00000561653 397 ntBASIC17.95■□□□□ 0.46
CTR9Q6PD62 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 AC138466.3-201ENST00000619983 221 ntBASIC17.95■□□□□ 0.46
CTR9Q6PD62 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.95■□□□□ 0.46
CTR9Q6PD62 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTR9Q6PD62 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.95■□□□□ 0.46
CTR9Q6PD62 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms